1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23 __VERSION__="ete2-2.0rev86"
24
25
26
27
28
29
30
31
32 try:
33 from PyQt4 import QtCore, QtGui
34 except ImportError:
35 import QtCore, QtGui
36
37 -class Ui_MainWindow(object):
38 - def setupUi(self, MainWindow):
39 MainWindow.setObjectName("MainWindow")
40 MainWindow.resize(673, 493)
41 self.centralwidget = QtGui.QWidget(MainWindow)
42 self.centralwidget.setGeometry(QtCore.QRect(0, 58, 673, 411))
43 self.centralwidget.setObjectName("centralwidget")
44 MainWindow.setCentralWidget(self.centralwidget)
45 self.menubar = QtGui.QMenuBar(MainWindow)
46 self.menubar.setGeometry(QtCore.QRect(0, 0, 673, 24))
47 self.menubar.setObjectName("menubar")
48 self.menuFile = QtGui.QMenu(self.menubar)
49 self.menuFile.setObjectName("menuFile")
50 self.menuAbout = QtGui.QMenu(self.menubar)
51 self.menuAbout.setObjectName("menuAbout")
52 MainWindow.setMenuBar(self.menubar)
53 self.statusbar = QtGui.QStatusBar(MainWindow)
54 self.statusbar.setGeometry(QtCore.QRect(0, 469, 673, 24))
55 self.statusbar.setObjectName("statusbar")
56 MainWindow.setStatusBar(self.statusbar)
57 self.toolBar = QtGui.QToolBar(MainWindow)
58 self.toolBar.setEnabled(True)
59 self.toolBar.setGeometry(QtCore.QRect(0, 24, 673, 34))
60 self.toolBar.setObjectName("toolBar")
61 MainWindow.addToolBar(QtCore.Qt.TopToolBarArea, self.toolBar)
62 self.actionOpen = QtGui.QAction(MainWindow)
63 icon = QtGui.QIcon()
64 icon.addPixmap(QtGui.QPixmap(":/ete icons/fileopen.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
65 self.actionOpen.setIcon(icon)
66 self.actionOpen.setObjectName("actionOpen")
67 self.actionPaste_newick = QtGui.QAction(MainWindow)
68 self.actionPaste_newick.setObjectName("actionPaste_newick")
69 self.actionSave_image = QtGui.QAction(MainWindow)
70 icon1 = QtGui.QIcon()
71 icon1.addPixmap(QtGui.QPixmap(":/ete icons/filesave.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
72 self.actionSave_image.setIcon(icon1)
73 self.actionSave_image.setObjectName("actionSave_image")
74 self.actionSave_region = QtGui.QAction(MainWindow)
75 self.actionSave_region.setObjectName("actionSave_region")
76 self.actionBranchLength = QtGui.QAction(MainWindow)
77 self.actionBranchLength.setCheckable(True)
78 icon2 = QtGui.QIcon()
79 icon2.addPixmap(QtGui.QPixmap(":/ete icons/show_dist.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
80 self.actionBranchLength.setIcon(icon2)
81 self.actionBranchLength.setObjectName("actionBranchLength")
82 self.actionZoomIn = QtGui.QAction(MainWindow)
83 icon3 = QtGui.QIcon()
84 icon3.addPixmap(QtGui.QPixmap(":/ete icons/zoom_in.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
85 self.actionZoomIn.setIcon(icon3)
86 self.actionZoomIn.setObjectName("actionZoomIn")
87 self.actionZoomOut = QtGui.QAction(MainWindow)
88 icon4 = QtGui.QIcon()
89 icon4.addPixmap(QtGui.QPixmap(":/ete icons/zoom_out.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
90 self.actionZoomOut.setIcon(icon4)
91 self.actionZoomOut.setObjectName("actionZoomOut")
92 self.actionETE = QtGui.QAction(MainWindow)
93 self.actionETE.setObjectName("actionETE")
94 self.actionForceTopology = QtGui.QAction(MainWindow)
95 self.actionForceTopology.setCheckable(True)
96 icon5 = QtGui.QIcon()
97 icon5.addPixmap(QtGui.QPixmap(":/ete icons/force_topo.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
98 self.actionForceTopology.setIcon(icon5)
99 self.actionForceTopology.setObjectName("actionForceTopology")
100 self.actionSave_newick = QtGui.QAction(MainWindow)
101 self.actionSave_newick.setIcon(icon1)
102 self.actionSave_newick.setObjectName("actionSave_newick")
103 self.actionZoomInX = QtGui.QAction(MainWindow)
104 icon6 = QtGui.QIcon()
105 icon6.addPixmap(QtGui.QPixmap(":/ete icons/x_expand.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
106 self.actionZoomInX.setIcon(icon6)
107 self.actionZoomInX.setObjectName("actionZoomInX")
108 self.actionZoomOutX = QtGui.QAction(MainWindow)
109 icon7 = QtGui.QIcon()
110 icon7.addPixmap(QtGui.QPixmap(":/ete icons/x_reduce.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
111 self.actionZoomOutX.setIcon(icon7)
112 self.actionZoomOutX.setObjectName("actionZoomOutX")
113 self.actionZoomInY = QtGui.QAction(MainWindow)
114 icon8 = QtGui.QIcon()
115 icon8.addPixmap(QtGui.QPixmap(":/ete icons/y_expand.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
116 self.actionZoomInY.setIcon(icon8)
117 self.actionZoomInY.setObjectName("actionZoomInY")
118 self.actionZoomOutY = QtGui.QAction(MainWindow)
119 icon9 = QtGui.QIcon()
120 icon9.addPixmap(QtGui.QPixmap(":/ete icons/y_reduce.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
121 self.actionZoomOutY.setIcon(icon9)
122 self.actionZoomOutY.setObjectName("actionZoomOutY")
123 self.actionFit2tree = QtGui.QAction(MainWindow)
124 icon10 = QtGui.QIcon()
125 icon10.addPixmap(QtGui.QPixmap(":/ete icons/fit_tree.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
126 self.actionFit2tree.setIcon(icon10)
127 self.actionFit2tree.setObjectName("actionFit2tree")
128 self.actionFit2region = QtGui.QAction(MainWindow)
129 icon11 = QtGui.QIcon()
130 icon11.addPixmap(QtGui.QPixmap(":/ete icons/fit_region.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
131 self.actionFit2region.setIcon(icon11)
132 self.actionFit2region.setObjectName("actionFit2region")
133 self.actionRenderPDF = QtGui.QAction(MainWindow)
134 icon12 = QtGui.QIcon()
135 icon12.addPixmap(QtGui.QPixmap(":/ete icons/export_pdf.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
136 self.actionRenderPDF.setIcon(icon12)
137 self.actionRenderPDF.setObjectName("actionRenderPDF")
138 self.actionSearchNode = QtGui.QAction(MainWindow)
139 icon13 = QtGui.QIcon()
140 icon13.addPixmap(QtGui.QPixmap(":/ete icons/search.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
141 self.actionSearchNode.setIcon(icon13)
142 self.actionSearchNode.setObjectName("actionSearchNode")
143 self.actionClear_search = QtGui.QAction(MainWindow)
144 icon14 = QtGui.QIcon()
145 icon14.addPixmap(QtGui.QPixmap(":/ete icons/clean_search.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
146 self.actionClear_search.setIcon(icon14)
147 self.actionClear_search.setObjectName("actionClear_search")
148 self.actionShow_newick = QtGui.QAction(MainWindow)
149 icon15 = QtGui.QIcon()
150 icon15.addPixmap(QtGui.QPixmap(":/ete icons/show_newick.png"), QtGui.QIcon.Normal, QtGui.QIcon.Off)
151 self.actionShow_newick.setIcon(icon15)
152 self.actionShow_newick.setObjectName("actionShow_newick")
153 self.actionShow_node_attributes_box = QtGui.QAction(MainWindow)
154 self.actionShow_node_attributes_box.setCheckable(True)
155 self.actionShow_node_attributes_box.setChecked(True)
156 self.actionShow_node_attributes_box.setObjectName("actionShow_node_attributes_box")
157 self.actionRender_selected_region = QtGui.QAction(MainWindow)
158 self.actionRender_selected_region.setIcon(icon12)
159 self.actionRender_selected_region.setShortcutContext(QtCore.Qt.WidgetShortcut)
160 self.actionRender_selected_region.setObjectName("actionRender_selected_region")
161 self.menuFile.addAction(self.actionOpen)
162 self.menuFile.addAction(self.actionPaste_newick)
163 self.menuFile.addAction(self.actionSave_newick)
164 self.menuFile.addAction(self.actionRenderPDF)
165 self.menuFile.addAction(self.actionRender_selected_region)
166 self.menuAbout.addAction(self.actionETE)
167 self.menubar.addAction(self.menuFile.menuAction())
168 self.menubar.addAction(self.menuAbout.menuAction())
169 self.toolBar.addAction(self.actionZoomIn)
170 self.toolBar.addAction(self.actionZoomOut)
171 self.toolBar.addAction(self.actionFit2tree)
172 self.toolBar.addAction(self.actionFit2region)
173 self.toolBar.addAction(self.actionZoomInX)
174 self.toolBar.addAction(self.actionZoomOutX)
175 self.toolBar.addAction(self.actionZoomInY)
176 self.toolBar.addAction(self.actionZoomOutY)
177 self.toolBar.addAction(self.actionSearchNode)
178 self.toolBar.addAction(self.actionClear_search)
179 self.toolBar.addAction(self.actionForceTopology)
180 self.toolBar.addAction(self.actionBranchLength)
181 self.toolBar.addAction(self.actionRenderPDF)
182 self.toolBar.addAction(self.actionShow_newick)
183
184 self.retranslateUi(MainWindow)
185 QtCore.QMetaObject.connectSlotsByName(MainWindow)
186
187 - def retranslateUi(self, MainWindow):
188 MainWindow.setWindowTitle(QtGui.QApplication.translate("MainWindow", "MainWindow", None, QtGui.QApplication.UnicodeUTF8))
189 self.menuFile.setTitle(QtGui.QApplication.translate("MainWindow", "File", None, QtGui.QApplication.UnicodeUTF8))
190 self.menuAbout.setTitle(QtGui.QApplication.translate("MainWindow", "About", None, QtGui.QApplication.UnicodeUTF8))
191 self.toolBar.setWindowTitle(QtGui.QApplication.translate("MainWindow", "toolBar", None, QtGui.QApplication.UnicodeUTF8))
192 self.actionOpen.setText(QtGui.QApplication.translate("MainWindow", "Open newick tree", None, QtGui.QApplication.UnicodeUTF8))
193 self.actionOpen.setShortcut(QtGui.QApplication.translate("MainWindow", "Ctrl+O", None, QtGui.QApplication.UnicodeUTF8))
194 self.actionPaste_newick.setText(QtGui.QApplication.translate("MainWindow", "Paste newick", None, QtGui.QApplication.UnicodeUTF8))
195 self.actionPaste_newick.setShortcut(QtGui.QApplication.translate("MainWindow", "Ctrl+P", None, QtGui.QApplication.UnicodeUTF8))
196 self.actionSave_image.setText(QtGui.QApplication.translate("MainWindow", "Save Image", None, QtGui.QApplication.UnicodeUTF8))
197 self.actionSave_region.setText(QtGui.QApplication.translate("MainWindow", "Save region", None, QtGui.QApplication.UnicodeUTF8))
198 self.actionSave_region.setShortcut(QtGui.QApplication.translate("MainWindow", "Ctrl+A", None, QtGui.QApplication.UnicodeUTF8))
199 self.actionBranchLength.setText(QtGui.QApplication.translate("MainWindow", "Show branch info", None, QtGui.QApplication.UnicodeUTF8))
200 self.actionBranchLength.setShortcut(QtGui.QApplication.translate("MainWindow", "L", None, QtGui.QApplication.UnicodeUTF8))
201 self.actionZoomIn.setText(QtGui.QApplication.translate("MainWindow", "Zoom in", None, QtGui.QApplication.UnicodeUTF8))
202 self.actionZoomIn.setShortcut(QtGui.QApplication.translate("MainWindow", "Z", None, QtGui.QApplication.UnicodeUTF8))
203 self.actionZoomOut.setText(QtGui.QApplication.translate("MainWindow", "Zoom out", None, QtGui.QApplication.UnicodeUTF8))
204 self.actionZoomOut.setShortcut(QtGui.QApplication.translate("MainWindow", "X", None, QtGui.QApplication.UnicodeUTF8))
205 self.actionETE.setText(QtGui.QApplication.translate("MainWindow", "ETE", None, QtGui.QApplication.UnicodeUTF8))
206 self.actionForceTopology.setText(QtGui.QApplication.translate("MainWindow", "Force topology", None, QtGui.QApplication.UnicodeUTF8))
207 self.actionForceTopology.setToolTip(QtGui.QApplication.translate("MainWindow", "Allows to see topology by setting assuming all branch lenghts are 1.0", None, QtGui.QApplication.UnicodeUTF8))
208 self.actionForceTopology.setShortcut(QtGui.QApplication.translate("MainWindow", "T", None, QtGui.QApplication.UnicodeUTF8))
209 self.actionSave_newick.setText(QtGui.QApplication.translate("MainWindow", "Save as newick", None, QtGui.QApplication.UnicodeUTF8))
210 self.actionZoomInX.setText(QtGui.QApplication.translate("MainWindow", "Increase X scale", None, QtGui.QApplication.UnicodeUTF8))
211 self.actionZoomOutX.setText(QtGui.QApplication.translate("MainWindow", "Decrease X scale", None, QtGui.QApplication.UnicodeUTF8))
212 self.actionZoomInY.setText(QtGui.QApplication.translate("MainWindow", "Increase Y scale", None, QtGui.QApplication.UnicodeUTF8))
213 self.actionZoomOutY.setText(QtGui.QApplication.translate("MainWindow", "Decrease Y scale", None, QtGui.QApplication.UnicodeUTF8))
214 self.actionFit2tree.setText(QtGui.QApplication.translate("MainWindow", "Fit to tree", None, QtGui.QApplication.UnicodeUTF8))
215 self.actionFit2tree.setShortcut(QtGui.QApplication.translate("MainWindow", "W", None, QtGui.QApplication.UnicodeUTF8))
216 self.actionFit2region.setText(QtGui.QApplication.translate("MainWindow", "Fit to selection", None, QtGui.QApplication.UnicodeUTF8))
217 self.actionFit2region.setShortcut(QtGui.QApplication.translate("MainWindow", "R", None, QtGui.QApplication.UnicodeUTF8))
218 self.actionRenderPDF.setText(QtGui.QApplication.translate("MainWindow", "Render PDF image", None, QtGui.QApplication.UnicodeUTF8))
219 self.actionSearchNode.setText(QtGui.QApplication.translate("MainWindow", "Search", None, QtGui.QApplication.UnicodeUTF8))
220 self.actionSearchNode.setShortcut(QtGui.QApplication.translate("MainWindow", "Ctrl+S", None, QtGui.QApplication.UnicodeUTF8))
221 self.actionClear_search.setText(QtGui.QApplication.translate("MainWindow", "Clear search", None, QtGui.QApplication.UnicodeUTF8))
222 self.actionClear_search.setShortcut(QtGui.QApplication.translate("MainWindow", "Ctrl+C", None, QtGui.QApplication.UnicodeUTF8))
223 self.actionShow_newick.setText(QtGui.QApplication.translate("MainWindow", "Show newick", None, QtGui.QApplication.UnicodeUTF8))
224 self.actionShow_newick.setShortcut(QtGui.QApplication.translate("MainWindow", "N", None, QtGui.QApplication.UnicodeUTF8))
225 self.actionShow_node_attributes_box.setText(QtGui.QApplication.translate("MainWindow", "Show node attributes box", None, QtGui.QApplication.UnicodeUTF8))
226 self.actionRender_selected_region.setText(QtGui.QApplication.translate("MainWindow", "Render selected region", None, QtGui.QApplication.UnicodeUTF8))
227
228 import ete_resources_rc
229